Wrong. Take my last game for example. No gold mines from the gold mine one. 2 twilight bees, and no Crystal. Kinda pissed me off on the crystal actually. Gold mine was no big deal, for some reason the whole area around me was saturated with gold mines. After conquering one Ai, and building 2 cities I had 6 gold mines to my name....yeesh.
I have done 100 turns of EACH of the adventure techs that spawn resources. Every single time it is without fail the exact same spawn. 100 times out of 100.
I did omit the fact that the numbers are actually 0-1 gold mine, 0-1 fruit and 0-1 bees, 0-1 gold, 0-1 ventari (I have ALWAYS gotten this never a 0 for me but I put the 0 for completness sake.), 0-1 crystal.
The only possible explanation for you seeing two bees is that your borders were very close to an enemy and he researched that tech, only to have the bees spawn in your territory.
Of course, they have vastly increased the distance that resources can spawn from your borders now however and they can now spawn outside your influence. Before 1.08 it was ALWAYS in your influence.
However this is my last response on these forums barring the support section for bug reports. Far too many G.I.F.T ed here.